Updates/fixes for CI, docs, tests, samples, and common library (#528)

- .github/workflows/continuous_integration.yml
  - apt-get update before apt-get install
  - remove libgtest-dev
  - actions-comment-pull-request: v2.4.3 -> v2.5.0
- .github/workflows/formatting.yml
  - create-pull-request: v5 -> v6
- cmake/rocprofiler_options.cmake
  - remove unused ROCPROFILER_DEBUG_TRACE and ROCPROFILER_LD_AQLPROFILE options
- samples/counter_collection/callback_client.cpp
  - corr_id field renamed to correlation_id
- samples/counter_collection/client.cpp
  - corr_id field renamed to correlation_id
- include/rocprofiler-sdk/fwd.h
  - In rocprofiler_record_counter_t: rename corr_id field to correlation_id
  - doxygen fixes
- lib/common/utility.*
  - remove get_accurate_clock_id_impl
  - timestamp_ns() defaults to CLOCK_BOOTTIME
- lib/rocprofiler-sdk/counters/core.cpp
  - fix spelling mistake: extrenal -> external
  - corr_id field renamed to correlation_id
- lib/rocprofiler-sdk-tool/tool.cpp
  - fix destruction of static tool::output_file before finalization
- scripts/update-docs.sh
  - define PROJECT_NAME
- tests/async-copy-tracing/validate.py
  - init_time and fini_time checks
  - hip_api_traces, marker_api_tracing
- tests/common/serialization.hpp
  - fix save function for rocprofiler_record_counter_t following rename of corr_id to correlation_id
- tests/kernel-tracing/validate.py
  - init_time and fini_time checks
  - relax test_total_runtime range
- tests/rocprofv3/tracing/CMakeLists.txt
  - remove -M from rocprofv3-test-systrace-execute
  - exclude test_hsa_api_trace in rocprofv3-test-systrace-validate due to HIP API tracing
- tests/rocprofv3/tracing/validate.py
  - update test_kernel_trace to accept mangled or demangled
- tests/tools/json-tool.cpp
  - remove use of GLOG
  - include init_time and fini_time
  - write_json(...) function

source/include/rocprofiler-sdk/fwd.h

@@ -344,8 +344,8 @@ typedef uint64_t rocprofiler_counter_dimension_id_t;
  */
 typedef union rocprofiler_user_data_t
 {
-    uint64_t value;
-    void*    ptr;
+    uint64_t value;  ///< usage example: set to process id, thread id, etc.
+    void*    ptr;    ///< usage example: set to address of data allocation
 } rocprofiler_user_data_t;
 
 //--------------------------------------------------------------------------------------//
@@ -504,10 +504,12 @@ rocprofiler_record_header_compute_hash(uint32_t category, uint32_t kind)
  */
 typedef struct
 {
-    const char* name;
-    size_t      instance_size;
-    rocprofiler_counter_dimension_id_t
-        id;  //<< Id for this dimension used by @ref rocprofiler_query_record_dimension_position
+    const char*                        name;
+    size_t                             instance_size;
+    rocprofiler_counter_dimension_id_t id;
+
+    /// @var id
+    /// @brief Id for this dimension used by @ref rocprofiler_query_record_dimension_position
 } rocprofiler_record_dimension_info_t;
 
 /**
@@ -515,9 +517,12 @@ typedef struct
  */
 typedef struct
 {
-    rocprofiler_counter_instance_id_t id;
-    double                            counter_value;  //<< counter value
-    rocprofiler_correlation_id_t      corr_id;
+    rocprofiler_counter_instance_id_t id;             ///< counter identifier
+    double                            counter_value;  ///< counter value
+    rocprofiler_correlation_id_t      correlation_id;
+
+    /// @var correlation_id
+    /// @brief Used to correlate the kernel data to an API call
 } rocprofiler_record_counter_t;
 
 /**