Updates/fixes for CI, docs, tests, samples, and common library (#528)

- .github/workflows/continuous_integration.yml
  - apt-get update before apt-get install
  - remove libgtest-dev
  - actions-comment-pull-request: v2.4.3 -> v2.5.0
- .github/workflows/formatting.yml
  - create-pull-request: v5 -> v6
- cmake/rocprofiler_options.cmake
  - remove unused ROCPROFILER_DEBUG_TRACE and ROCPROFILER_LD_AQLPROFILE options
- samples/counter_collection/callback_client.cpp
  - corr_id field renamed to correlation_id
- samples/counter_collection/client.cpp
  - corr_id field renamed to correlation_id
- include/rocprofiler-sdk/fwd.h
  - In rocprofiler_record_counter_t: rename corr_id field to correlation_id
  - doxygen fixes
- lib/common/utility.*
  - remove get_accurate_clock_id_impl
  - timestamp_ns() defaults to CLOCK_BOOTTIME
- lib/rocprofiler-sdk/counters/core.cpp
  - fix spelling mistake: extrenal -> external
  - corr_id field renamed to correlation_id
- lib/rocprofiler-sdk-tool/tool.cpp
  - fix destruction of static tool::output_file before finalization
- scripts/update-docs.sh
  - define PROJECT_NAME
- tests/async-copy-tracing/validate.py
  - init_time and fini_time checks
  - hip_api_traces, marker_api_tracing
- tests/common/serialization.hpp
  - fix save function for rocprofiler_record_counter_t following rename of corr_id to correlation_id
- tests/kernel-tracing/validate.py
  - init_time and fini_time checks
  - relax test_total_runtime range
- tests/rocprofv3/tracing/CMakeLists.txt
  - remove -M from rocprofv3-test-systrace-execute
  - exclude test_hsa_api_trace in rocprofv3-test-systrace-validate due to HIP API tracing
- tests/rocprofv3/tracing/validate.py
  - update test_kernel_trace to accept mangled or demangled
- tests/tools/json-tool.cpp
  - remove use of GLOG
  - include init_time and fini_time
  - write_json(...) function

tests/common/serialization.hpp

@@ -205,9 +205,9 @@ save(ArchiveT& ar, rocprofiler_callback_tracing_record_t data)
 {
     SAVE_DATA_FIELD(context_id);
     SAVE_DATA_FIELD(thread_id);
-    SAVE_DATA_FIELD(correlation_id);
     SAVE_DATA_FIELD(kind);
     SAVE_DATA_FIELD(operation);
+    SAVE_DATA_FIELD(correlation_id);
     SAVE_DATA_FIELD(phase);
 }
 
@@ -217,8 +217,8 @@ save_buffer_tracing_api_record(ArchiveT& ar, Tp data)
 {
     SAVE_DATA_FIELD(size);
     SAVE_DATA_FIELD(kind);
-    SAVE_DATA_FIELD(correlation_id);
     SAVE_DATA_FIELD(operation);
+    SAVE_DATA_FIELD(correlation_id);
     SAVE_DATA_FIELD(start_timestamp);
     SAVE_DATA_FIELD(end_timestamp);
     SAVE_DATA_FIELD(thread_id);
@@ -237,7 +237,7 @@ save(ArchiveT& ar, rocprofiler_record_counter_t data)
 {
     SAVE_DATA_FIELD(id);
     SAVE_DATA_FIELD(counter_value);
-    SAVE_DATA_FIELD(corr_id);
+    SAVE_DATA_FIELD(correlation_id);
 }
 
 template <typename ArchiveT>
@@ -278,8 +278,8 @@ save(ArchiveT& ar, rocprofiler_buffer_tracing_memory_copy_record_t data)
 {
     SAVE_DATA_FIELD(size);
     SAVE_DATA_FIELD(kind);
-    SAVE_DATA_FIELD(correlation_id);
     SAVE_DATA_FIELD(operation);
+    SAVE_DATA_FIELD(correlation_id);
     SAVE_DATA_FIELD(start_timestamp);
     SAVE_DATA_FIELD(end_timestamp);
     SAVE_DATA_FIELD(dst_agent_id);