Miscellaneous updates (#959)

- missing-new-line CI job: ensures all source files end with new line
- logging updates
- add new line to the end of many files
- fix header include ordering is misc places
- transition to use hsa::get_core_table() and hsa::get_amd_ext_table() in various places instead of making copies

tests/thread-trace/trace_callbacks.cpp

@@ -238,4 +238,4 @@ callbacks_fini()
 }
 
 }  // namespace Callbacks
-}  // namespace ATTTest
+}  // namespace ATTTest