Submitting jobs to cdash (#124)
* Submitting jobs to cdash * Fail on submit * submit url env * submit url env * try passing submit url as arg * fix submit url * Updated default URL * Add submissions for remaining ubuntu focal workflow jobs * Replace g++ with gcc in dashboard build name * Add --ctest-args to run-ci.sh * Add cdash support for bionic, jammy, and opensuse workflows * Decrease CTEST_CUSTOM_MAXIMUM_PASSED_TEST_OUTPUT_SIZE * OMNITRACE_BUILD_CODECOV option * Support code coverage in CDash script * CI dyninst built with debug info * Update ci-containers - cron schedule moved 4 hours later to UTC+5 * Update implementation of config::configure_signal_handler - using lambdas failed to compile with codecov flags * Add codecov job to ubuntu focal workflow * Fix support for --ctest-args in run-ci script * Fix ubuntu workflows * Fix quotation handling in run-ci script * git safe directory for codecov * New MPI examples * Remove --stop-on-failure * dynamic_library update - find_library_path checks procfs maps - invoke find_library_path with no additional args to resolve to mapped file * RCCLP uses dynamic_library * check if file exists for memory_map_files metadata * Testing updates - include new mpi examples in tests - fix test labels - test critical-trace exe * Update MPI C examples tests (needed arg) * Remove try/catch block from critical-trace * Fix sampling max wait when shutting down * Fix test env for critical-trace * Fix settings for critical-trace - disable time output: data is deterministic - disable PID suffixes: not multiprocess * Update critical-trace ctest * Update critical-trace exe - throw error if input cannot be opened - throw error if input has no data * Update lulesh example with more kokkos tools usage * Fix tasking issue with critical_trace and roctracer - were not setting pools to active - also sync before critical_trace::get_entries * Increase verbosity of critical-trace tests * Update code coverage tests - skip code coverage + preload - code-coverage python example and test * Remove duplication omnitrace.initialize function * Skip python3.6 for ubuntu jammy * Update MPI examples - use MPI_Isend and MPI_Irecv - explicitly use MPI_Bcast * Update Formatting.cmake - include C files in examples * run-ci script does not check return of coverage * mpi-allreduce link to libm * Update ctest args in run-ci script * Update dyninst submodule - safety improvements in BinaryEdit::openResolvedLibraryName * capture cmake error for ctest_coverage
This commit is contained in:
Jonathan R. Madsen
committed by
GitHub
GitHub
parent
139070a2de
commit
46b6db1a4c
+30
-10
@@ -751,7 +751,7 @@ CalcHourglassControlForElems(Domain& domain, Real_t determ[], Real_t hgcoef)
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int error = 0;
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Kokkos::parallel_reduce(
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numElem,
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"CalcHourglassControlForElems", numElem,
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KOKKOS_LAMBDA(const int i, int& err) {
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Real_t x1[8], y1[8], z1[8];
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@@ -813,7 +813,7 @@ CalcVolumeForceForElems(Domain& domain)
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// check for negative element volume
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int error = 0;
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Kokkos::parallel_reduce(
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numElem,
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"CalcVolumeForceForElems", numElem,
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KOKKOS_LAMBDA(const int k, int& err) {
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if(determ[k] <= Real_t(0.0))
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{
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@@ -1221,7 +1221,7 @@ CalcLagrangeElements(Domain& domain)
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int error = 0;
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Kokkos::parallel_reduce(
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numElem,
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"CalcLagrangeElements", numElem,
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KOKKOS_LAMBDA(const int k, int& err) {
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Real_t vdov = domain.dxx(k) + domain.dyy(k) + domain.dzz(k);
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Real_t vdovthird = vdov / Real_t(3.0);
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@@ -1607,7 +1607,7 @@ CalcQForElems(Domain& domain)
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Index_t idx = 0;
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Kokkos::parallel_reduce(
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numElem,
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"CalcQForElems", numElem,
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KOKKOS_LAMBDA(const Index_t& i, Index_t& count) {
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if(domain.q(i) > domain.qstop())
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{
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@@ -1931,7 +1931,7 @@ ApplyMaterialPropertiesForElems(Domain& domain)
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int error = 0;
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Kokkos::parallel_reduce(
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numElem,
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"ApplyMaterialPropertiesForElems", numElem,
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KOKKOS_LAMBDA(const int i, int& err) {
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Real_t vc = domain.v(i);
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if(eosvmin != Real_t(0.))
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@@ -1949,7 +1949,7 @@ ApplyMaterialPropertiesForElems(Domain& domain)
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},
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error);
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if(error)
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if(error != 0)
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#if USE_MPI
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MPI_Abort(MPI_COMM_WORLD, VolumeError);
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#else
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@@ -2015,7 +2015,7 @@ CalcCourantConstraintForElems(Domain& domain, Index_t length, Index_t r, Real_t
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MinFinder result;
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Kokkos::parallel_reduce(
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length,
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"CalcCourantConstraintForElems", length,
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KOKKOS_LAMBDA(const int i, MinFinder& minf) {
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Index_t indx = domain.regElemlist(r, i);
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Real_t dtf = domain.ss(indx) * domain.ss(indx);
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@@ -2065,7 +2065,7 @@ CalcHydroConstraintForElems(Domain& domain, Index_t length, Index_t r, Real_t dv
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MinFinder result;
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Kokkos::parallel_reduce(
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length,
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"CalcHydroConstraintForElems", length,
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KOKKOS_LAMBDA(const int i, MinFinder& minf) {
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Index_t indx = domain.regElemlist(r, i);
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@@ -2167,8 +2167,9 @@ main(int argc, char* argv[])
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myRank = 0;
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#endif
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Kokkos::initialize();
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Kokkos::initialize(argc, argv);
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{
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Kokkos::Tools::pushRegion("initialization");
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opts.its = 9999999;
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opts.nx = 30;
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opts.numReg = 11;
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@@ -2223,24 +2224,41 @@ main(int argc, char* argv[])
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MPI_Barrier(MPI_COMM_WORLD);
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#endif
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Kokkos::Tools::popRegion();
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#if USE_MPI
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double start = MPI_Wtime();
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#else
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timeval start;
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gettimeofday(&start, NULL);
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gettimeofday(&start, nullptr);
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#endif
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uint32_t _time_incrp = 0;
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uint32_t _leap_frogp = 0;
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Kokkos::Tools::createProfileSection("TimeIncr", &_time_incrp);
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Kokkos::Tools::createProfileSection("LeapFrog", &_leap_frogp);
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while((locDom.time() < locDom.stoptime()) && (locDom.cycle() < opts.its))
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{
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Kokkos::Tools::startSection(_time_incrp);
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TimeIncrement(locDom);
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Kokkos::Tools::stopSection(_time_incrp);
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Kokkos::Tools::startSection(_leap_frogp);
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LagrangeLeapFrog(locDom);
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Kokkos::Tools::stopSection(_leap_frogp);
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if((opts.showProg != 0) && (opts.quiet == 0) && (myRank == 0))
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{
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printf("cycle = %d, time = %e, dt=%e\n", locDom.cycle(),
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double(locDom.time()), double(locDom.deltatime()));
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}
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Kokkos::Tools::markEvent("completed_timestep");
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}
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Kokkos::Tools::destroyProfileSection(_time_incrp);
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Kokkos::Tools::destroyProfileSection(_leap_frogp);
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double elapsed_time;
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#if USE_MPI
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elapsed_time = MPI_Wtime() - start;
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@@ -2258,6 +2276,7 @@ main(int argc, char* argv[])
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elapsed_timeG = elapsed_time;
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#endif
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Kokkos::Tools::pushRegion("finalization");
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if(opts.viz)
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{
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DumpToVisit(locDom, opts.numFiles, myRank, numRanks);
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@@ -2267,6 +2286,7 @@ main(int argc, char* argv[])
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{
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VerifyAndWriteFinalOutput(elapsed_timeG, locDom, opts.nx, numRanks);
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}
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Kokkos::Tools::popRegion();
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buffer = Kokkos::View<Real_t*>();
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}
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