[rocprofv3-benchmark] SDK and rocprofv3 Benchmarking Suite (#157)

* Adding Benchmarking Stg1

* config fix

* reset

* add jpeg and decode traces in iteration

* address comments benchmark config files.

* address comments.

* address comments.

* address comments: revert cntrl ctx.

* address comments: revert csv output.

* resolve merge conflits.

* format.

* build fix.

* fix hip runtime api traces.

* loop cb services.

* format.

* bug fix.

* Fix operator>

- public C++ comparison operator

* Update configuration options

- support selected regions (--selected-regions)
- support writing output config json (--output-config)
- update serialization data

* rocprofv3 tool library misc updates

- lambda for starting context
- support for writing config json

* Tool library updates

- Finished support for all benchmarking modes
- Added build spec support to config json

* Fix ROCPROFILER_SOVERSION

- this value should not be multiplied by 10,000

* Minor tweak to rocprofv3

* Benchmarking scripts

* formatting

* Fix duplicate include

* Add reproducible-dispatch-count test app

- used in benchmarking

* registration logging

- report number of registered contexts and active contexts after client initialization

* Serialize environment in rocprofv3 output config

* ROCPROFILER_BUILD_BENCHMARK CMake option

* Update benchmark SQL schema

- hash_id is text
- add md5sum to benchmarked_app
- remove app_id from benchmarked_sdk
- add sdk_id to benchmark_config
- separate hip_trace into hip_runtime_trace and hip_compiler_trace
- use INT instead of INTEGER for MySQL compatibility
- add count column in benchmark_statistics
- allow std_dev to be NULL in benchmark_statistics

* Update rocprofv3-benchmark.py

- use md5 instead of python hash (which includes random seed)
- use args.mysql_database
- compute md5sum of executable
- fix insert_benchmark_config
  - marker trace fixes
  - memory allocation fixes
  - split hip_trace into hip_{runtime,compiler}_trace
- remove app_id from benchmarked_sdk
- support warmup runs
- count field in benchmark_statistics

* Support launcher and environment in YAML

* Update reproducible-dispatch-count.cpp

- support mode which doesn't use hip event timing

* Misc rocprofv3-benchmark.py updates

- fix some MySQL support
- remove some unnecessary logging

* support mysql db.

* Format.

* Updated SQL input files

- moved benchmark_schema.sql to benchmark_table.sql
- added benchmark_views.sql
  - uses {{metric}} syntax for variable substitution

* cmake formatting

* update rocprofv3-benchmark.py

- benchmark config labels
- overhead views

* Encode rocprofv3-benchmark PID in rocprofv3 and timem output files

* Minor tweak to benchmark_views.sql

- include count
- reorder fields for readability

* split statements and use IS if values is NONE.

* use backtick instead of double quotes and add IS before NOT NULL.:

* Adding Mandelbrot Benchmark App

* Adding Dockerfile example

* Update dockerfile

* Update dockerfile

* [SDK] rocprofiler_query_external_correlation_id_request_kind_name

* Execution-profile benchmark mode

* Execution profile SQL support

* Rename mandlebrot folder + misc clang-tidy

* [rocprofv3-benchmark] Execution profile support

* Update installation

* add work dir when setting git revision, useful when building outside src.

* Set FULL_VERSION_STRING and ROCPROFILER_SDK_GIT_REVISION

- when benchmark folder is top-level

* Remove unused python packages from requirements.txt

* Use ldd/pyelftools to include linked libs for md5sum

- also add --filter-benchmark and --filter-rocprofv3 options
- support labeling the rocprofv3 options
- use more argparse groups
- more generic application of filters
- support variable substitution in environment, e.g. PATH=/some/path:$PATH

* Environment improvements

- improve reproducibility when env set via input file vs. shell
- support "environment-ignore" to remove environment variables

* Misc formatting

* Misc. fix

* use backticks for defining new columns name

* Support shuffling the order of benchmark modes/rocprofv3 args

* Address review comments

* Update Dockerfile

- rename to Dockerfile
- reduce to one layer

* Support docker build arg BRANCH

---------

Co-authored-by: Ammar ELWazir <aelwazir@amd.com>
Co-authored-by: Kandula, Venkateshwar reddy <Venkateshwarreddy.Kandula@amd.com>
Co-authored-by: Venkateshwar Reddy Kandula <vkandula@amd.com>
Co-authored-by: Madsen, Jonathan <Jonathan.Madsen@amd.com>
Co-authored-by: Jonathan R. Madsen <jonathanrmadsen@gmail.com>

.github/workflows/formatting.yml

@@ -70,7 +70,7 @@ jobs:
     - name: Run clang-format
       run: |
         set +e
-        FILES=$(find samples source tests -type f | egrep '\.(h|hpp|hh|c|cc|cpp)(|\.in)$')
+        FILES=$(find samples source tests benchmark -type f | egrep '\.(h|hpp|hh|c|cc|cpp)(|\.in)$')
         FORMAT_OUT=$(clang-format-11 -i ${FILES})
         if [ $(git diff | wc -l) -ne 0 ]; then
           echo -e "\nError! Code not formatted. Run clang-format (version 11)...\n"
@@ -130,7 +130,7 @@ jobs:
       shell: bash
       run: |
         OUTFILE=missing_newline.txt
-        for i in $(find source/lib source/include tests samples cmake -type f | egrep -v '\.bin$'); do VAL=$(tail -c 1 ${i}); if [ -n "${VAL}" ]; then echo "- ${i}" >> ${OUTFILE}; fi; done
+        for i in $(find source tests samples benchmark docker cmake -type f | egrep -v '\.(bin|png|csv)$|source/docs/_(build|doxygen)'); do VAL=$(tail -c 1 ${i}); if [ -n "${VAL}" ]; then echo "- ${i}" >> ${OUTFILE}; fi; done
         if [[ -f ${OUTFILE} && $(cat ${OUTFILE} | wc -l) -gt 0 ]]; then
           echo -e "\nError! Source code missing new line at end of file...\n"
           echo -e "\nFiles:\n"