[rocprofv3] Add rocpd output support (part 1: prelude) (#401)

* [rocprofv3] Add rocpd output support (part 1: prelude)

- git submodules for sqlite3, GOTCHA, and pybind11
- HIP stream data
- rocprofiler_query_intercept_table_name(...)
- serialization load
- rocprofiler::sdk::get_perfetto_category(KindT)
- rocprofiler::sdk::parse::strip
- common library updates
  - md5sum
  - hasher
  - simple_timer
  - static_tl_object
  - get_process_start_time_ns(pid_t)
- output library updates
  - node_info
  - file_generator (generator is now virtual base class)
  - stream info updates

* Added submodules

* Code review updates

* Minor unused-but-set-X warning fixes

* Update CI

- install libsqlite3-dev package

* Update CI

- install libsqlite3-dev package

* Fix static thread-local object memory leak

- also fix signal handler chaining

* Remove URL from comment

* Remove page migration exception

* Enable ROCPROFILER_BUILD_SQLITE3 by default

- try find_package(SQLite3) first and then build when ROCPROFILER_BUILD_SQLITE3=ON

* Fix gotcha installation

- make install of target optional

* Validate tracing + counter collection dispatch data

- i.e. correlation ids, thread ids, timestamps

* Make find_package(SQLite3) optional

- ROCm CI does not have SQLite3 dev package installed and cannot build from source (missing tclsh)

* Fixes to tracing + counter collection test

* get_process_start_time_ns update

- original implementation did not work

* Fix pytest-packages test_perfetto_data for counter collection

- erroneous failure when used with same PMC + multiple agents

* cmake policy: option() honors normal variables

- for GOTCHA submodule

* Improve samples/api_buffered_tracing stability

- reduce likelihood of sporadic exception throw

* Update gotcha submodule

---------

Co-authored-by: Jonathan R. Madsen <jonathanrmadsen@gmail.com>

source/lib/output/output_stream.cpp

@@ -87,7 +87,10 @@ get_output_filename(const output_config& cfg, std::string_view fname, std::strin
 }
 
 output_stream
-get_output_stream(const output_config& cfg, std::string_view fname, std::string_view ext)
+get_output_stream(const output_config& cfg,
+                  std::string_view     fname,
+                  std::string_view     ext,
+                  std::ios::openmode   mode)
 {
     auto cfg_output_path = tool::format_path(cfg.output_path);
 
@@ -99,7 +102,7 @@ get_output_stream(const output_config& cfg, std::string_view fname, std::string_
         return {&std::clog, [](auto*&) {}};
 
     auto  output_file = get_output_filename(cfg, fname, ext);
-    auto* _ofs        = new(std::nothrow) std::ofstream{output_file};
+    auto* _ofs        = new(std::nothrow) std::ofstream{output_file, mode};
 
     LOG_IF(FATAL, !_ofs) << fmt::format("Failed to allocate ofstream for output file '{}'",
                                         output_file);