Reorganization and critical trace support (#17)

* Roctracer wall clock integration (#16)

* Integrates roctracer values into wall-clock

* Fixed scoping + timemory roctracer

* Fixed data race in roctracer

* Synchronized HIP API on main thread

- Cache hip activity callbacks and execute on main thread
- Minor updates to transpose

* Debugging + MPI + transpose updates

* PTL + HSA and timemory + kernel timing

- PTL usage fixed HSA + timemory issues bc we could control the thread destruction
- Fixed laps counting in roctracer callbacks

* Ignore select HIP API types

- The ignored API types are ignored because there appears to be a bug
  which causes the "end" callback to be labeled as begin
- hipDeviceEnablePeerAccess
- hipImportExternalMemory
- hipDestroyExternalMemory

* Tweaks to PTL config

* Timemory update + pid-prefix w/ mpi headers

- %pid%- prefix with mpi headers
- timemory submodule update

* CMake + critical trace + reorganize library source

- clang-tidy tweaks
- cmake function updates to use hosttrace_ prefix
- update gitignore
- cmake HOSTTRACE_MAX_THREADS option
- Formatting.cmake
- cleaned up MacroUtilities.cmake
- PTL submodule + usage
- tweak to Findroctracer.cmake
- MT transpose
- Updated PTL submodule
- Updated timemory submodule
- fix to hosttrace return value type if type not found
- reorganized library source code
- support for critical trace

* Remove bits/stdint-uintn.h headers

* Rename + config + depth + critical path

- rename hosttrace_timemory_data to instrumentation_bundles
- rename hosttrace_bundle_t to main_bundle_t
- rename bundle_t to instrumentation_bundle_t
- rework of configuration setup
- critical_trace write directly to file option
- tweaked depth calculation
- updated timemory submodule
- improved parallel support in roctracer callbacks
- working critical_trace
- perfetto device-critical-trace and host-critical-trace categories
- made transpose example parallel
- made parallel-overhead example a bit uneven
- relocated LTO activation

* Fixed duplicates in perfetto critical-trace

* reworked critical trace support

- substantial perf improvement (30-45 min -> 30 sec)
- changes to configuration (new and removed options)

* Removed "%pid%-" output prefix in mpi_gotcha

* Update timemory submodule

examples/parallel-overhead/parallel-overhead.cpp

@@ -38,7 +38,10 @@ main(int argc, char** argv)
 
     std::vector<std::thread> threads{};
     for(size_t i = 0; i < nthread; ++i)
-        threads.emplace_back(&run, nitr, nfib);
+    {
+        size_t _nitr = ((i % 2) == 1) ? (nitr - (0.1 * nitr)) : (nitr + (0.1 * nitr));
+        threads.emplace_back(&run, _nitr, nfib);
+    }
 
     for(auto& itr : threads)
         itr.join();