Code Coverage Support (#46)

* Code-coverage support

* Examples update

- code-coverage example
- tweak transpose and parallel-overhead

* Coverage output + testing

- config::get_setting value(...)
- REGULAR_EXPRESSION -> REGEX in cmake func args
- coverage.hpp header
- coverage JSON
- coverage tests

* cmake formatting

* Library instrumentation w/o main + more

- fixed library instrumentation w/o main
- use TIMEMORY_PROJECT_NAME in output messages
- removed '--driver' option from omnitrace exe
- support coverage in trace mode
- OMNITRACE_KOKKOS_KERNEL_LOGGER
- support multiple calls to omnitrace_set_env after init if already called
- support multiple calls to omnitrace_set_mpi after init if same args
- support multiple calls to omnitrace_init if same mode
- unique_ptr_t for thread_data which calls finalize when thread_data is destroyed
- tweaked openmp tests
- improved finalization

* Replace CI --output-on-failure with -V

* Fix to OMNITRACE_DL_INVOKE

* omnitrace-exe and testing updates

- omnitrace::omnitrace-timemory interface library
- support for configs in omnitrace exe
- print-{available,instrumented,...} opts no longer exit w/o --simulate
- all tests apply --print-instrumented functions
- tweaked coverage tests
- print-* options print instructions not address range

* Remove OMNITRACE_DEBUG_FINALIZE=ON from CI

* Python cmake tweaks

* Tweak test ordering

* Upload CI artifacts if fail or success

* CI Python tweaks

- Use OMNITRACE_PYTHON_PREFIX and OMNITRACE_PYTHON_ENVS

* CI ELFULTILS_DOWNLOAD_VERSION

* test tweaks

- labels and more coverage tests

* tweak to omnitrace --config handling

* Update module/function constraint handling + PP

- tweak pre-processor definition handling
- removed free-standing module_constraint
- remove free-standing routine_constraint
- remove module_name.find("omnitrace") module constraint
- fully handle the output path of omnitrace *-instr files
- get_use_code_coverage config option
- print-coverage option
- coverage_module_functions

* use github.job not github.name

* Re-enable HSA_ENABLE_INTERRUPT

- remove coverage address report

source/bin/tests/CMakeLists.txt

@@ -4,7 +4,7 @@ function(OMNITRACE_ADD_BIN_TEST)
         TEST
         "" # options
         "NAME;TARGET;TIMEOUT;WORKING_DIRECTORY" # single value args
-        "ARGS;ENVIRONMENT;LABELS;PROPERTIES;PASS_REGULAR_EXPRESSION;FAIL_REGULAR_EXPRESSION;SKIP_REGULAR_EXPRESSION;DEPENDS;COMMAND" # multiple
+        "ARGS;ENVIRONMENT;LABELS;PROPERTIES;PASS_REGEX;FAIL_REGEX;SKIP_REGEX;DEPENDS;COMMAND" # multiple
         # value args
         ${ARGN})
 
@@ -50,11 +50,11 @@ function(OMNITRACE_ADD_BIN_TEST)
                        LABELS
                        "omnitrace-bin;${TEST_LABELS}"
                        PASS_REGULAR_EXPRESSION
-                       "${TEST_PASS_REGULAR_EXPRESSION}"
+                       "${TEST_PASS_REGEX}"
                        FAIL_REGULAR_EXPRESSION
-                       "${TEST_FAIL_REGULAR_EXPRESSION}"
+                       "${TEST_FAIL_REGEX}"
                        SKIP_REGULAR_EXPRESSION
-                       "${TEST_SKIP_REGULAR_EXPRESSION}"
+                       "${TEST_SKIP_REGEX}"
                        ${TEST_PROPERTIES})
     elseif(TARGET ${TEST_TARGET})
         add_test(
@@ -73,11 +73,11 @@ function(OMNITRACE_ADD_BIN_TEST)
                        LABELS
                        "omnitrace-bin;${TEST_LABELS}"
                        PASS_REGULAR_EXPRESSION
-                       "${TEST_PASS_REGULAR_EXPRESSION}"
+                       "${TEST_PASS_REGEX}"
                        FAIL_REGULAR_EXPRESSION
-                       "${TEST_FAIL_REGULAR_EXPRESSION}"
+                       "${TEST_FAIL_REGEX}"
                        SKIP_REGULAR_EXPRESSION
-                       "${TEST_SKIP_REGULAR_EXPRESSION}"
+                       "${TEST_SKIP_REGEX}"
                        ${TEST_PROPERTIES})
     elseif(OMNITRACE_BUILD_TESTING)
         message(FATAL_ERROR "Error! ${TEST_TARGET} does not exist")
@@ -90,7 +90,7 @@ omnitrace_add_bin_test(
     ARGS --help
     LABELS omnitrace-exe
     TIMEOUT 45
-    PASS_REGULAR_EXPRESSION
+    PASS_REGEX
         ".*\\\[omnitrace\\\] Usage:.*\\\[DEBUG OPTIONS\\\].*\\\[MODE OPTIONS\\\].*\\\[LIBRARY OPTIONS\\\].*\\\[SYMBOL SELECTION OPTIONS\\\].*\\\[RUNTIME OPTIONS\\\].*\\\[GRANULARITY OPTIONS\\\].*\\\[DYNINST OPTIONS\\\].*"
     )
 
@@ -115,7 +115,7 @@ omnitrace_add_bin_test(
     WORKING_DIRECTORY
         ${PROJECT_BINARY_DIR}/omnitrace-tests-output/omnitrace-exe-simulate-ls
     TIMEOUT 60
-    PASS_REGULAR_EXPRESSION
+    PASS_REGEX
         ".*available-instr.json.*available-instr.txt.*available-instr.xml.*excluded-instr.json.*excluded-instr.txt.*excluded-instr.xml.*instrumented-instr.json.*instrumented-instr.txt.*instrumented-instr.xml.*overlapping-instr.json.*overlapping-instr.txt.*overlapping-instr.xml.*"
     )
 
@@ -125,7 +125,7 @@ omnitrace_add_bin_test(
     ARGS --help
     LABELS omnitrace-avail
     TIMEOUT 45
-    PASS_REGULAR_EXPRESSION
+    PASS_REGEX
         ".*\\\[omnitrace-avail\\\] Usage:.*\\\[CATEGORIES\\\].*\\\[VIEW OPTIONS\\\].*\\\[COLUMN OPTIONS\\\].*\\\[WIDTH OPTIONS\\\].*\\\[OUTPUT OPTIONS\\\].*"
     )
 
@@ -135,7 +135,7 @@ omnitrace_add_bin_test(
     ARGS -r wall_clock -C --available
     LABELS omnitrace-avail
     TIMEOUT 45
-    PASS_REGULAR_EXPRESSION
+    PASS_REGEX
         "\\\|[-]+\\\|\n\\\|[ ]+COMPONENT[ ]+\\\|\n\\\|[-]+\\\|\n\\\| (wall_clock)[ ]+\\\|\n\\\| (sampling_wall_clock)[ ]+\\\|\n\\\|[-]+\\\|"
     )
 
@@ -145,8 +145,8 @@ omnitrace_add_bin_test(
     ARGS --categories settings::omnitrace --brief
     LABELS omnitrace-avail
     TIMEOUT 45
-    PASS_REGULAR_EXPRESSION "OMNITRACE_(SETTINGS_DESC|OUTPUT_FILE|OUTPUT_PREFIX)"
-    FAIL_REGULAR_EXPRESSION
+    PASS_REGEX "OMNITRACE_(SETTINGS_DESC|OUTPUT_FILE|OUTPUT_PREFIX)"
+    FAIL_REGEX
         "OMNITRACE_(ADD_SECONDARY|SCIENTIFIC|PRECISION|MEMORY_PRECISION|TIMING_PRECISION)"
     )
 
@@ -156,6 +156,6 @@ omnitrace_add_bin_test(
     ARGS --categories settings::timemory --brief
     LABELS omnitrace-avail
     TIMEOUT 45
-    PASS_REGULAR_EXPRESSION
+    PASS_REGEX
         "OMNITRACE_(ADD_SECONDARY|SCIENTIFIC|PRECISION|MEMORY_PRECISION|TIMING_PRECISION)"
-    FAIL_REGULAR_EXPRESSION "OMNITRACE_(SETTINGS_DESC|OUTPUT_FILE)")
+    FAIL_REGEX "OMNITRACE_(SETTINGS_DESC|OUTPUT_FILE)")