Rework sampling and colorized logs (#140)
## Overview
This is a significant PR which has 3 very notable characteristics:
1. Omnitrace colorizes most of it's logging
2. Completely reworked the sampling
- Samples now record the current instruction pointers instead of strings
- This _dramatically_ decreases the overhead of taking a sample
- The collection of metrics during a sample are split out into another component, enabling that data collection to be disabled -- which decreases the sampling overhead even further
- When both `OMNITRACE_SAMPLING_CPUTIME` and `OMNITRACE_SAMPLING_REALTIME` are ON:
- `OMNITRACE_SAMPLING_CPUTIME_FREQ` and `OMNITRACE_SAMPLING_REALTIME_FREQ` can be used to individually control the sampling frequency
- `OMNITRACE_SAMPLING_CPUTIME_DELAY` and `OMNITRACE_SAMPLING_REALTIME_DELAY` can be used to individually control the delay time before starting
- Now, omnitrace does not start a real-time sampler on the main thread unless `OMNITRACE_SAMPLING_REALTIME` is ON
- In the future, an `OMNITRACE_SAMPLING_TIDS` (and real-time, cpu-time variants) configuration variable(s) will allow you to select which threads will be sampled
3. Files produced by `omnitrace` exe -- `available-instr.txt`, `instrumented-instr.txt`, etc. -- now no longer has `-instr` suffix and are placed in `instrumentation/` subfolder, i.e. `available-instr.txt` -> instrumentation/available.txt`
- This helped de-clutter the output folder
Most of the other edits were reorganization (e.g. internal namespace changes), cleanup, and splitting up functionality.
## Bug Fixes
There is a bug fix with respect to the HSA callbacks which disabled sampling on child threads when an HSA API call was made
## Details
- created thread_info struct for mapping different thread IDs
- reorganized file structure significantly
- added categories.hpp, concepts.hpp
- moved around name trait definitions
- moved all omnitrace components into `omnitrace::component` namespace
- there was a lot of inconsistency b/t using `tim::component` in some places and `omnitrace::component`
- added macros like OMNITRACE_DECLARE_COMPONENT in lieu of TIMEMORY_DECLARE_COMPONENT
- OMNITRACE_CRITICAL_TRACE_NUM_THREADS -> OMNITRACE_THREAD_POOL_SIZE
- roctracer and critical_trace use same thread pool
- critical_trace functions do not lock anymore bc of thread-local TaskGroup
- added `component::local_category_region` to support using `component::category_region` without explicitly passing in name
- removed `component::omnitrace` (unused)
- migrated KokkosP and OMPT to use `component::local_category_region`
- removed `component::user_region` as a result
- migrated omnitrace_{push,pop}_{trace,region}_hidden to use component::category_region
- removed `component::functors` as a result
- migrated some ppdefs
- `api::omnitrace` -> `project::omnitrace`
- `api::(...)` -> `category::(...)`
- improved recording the execution time of threads
- migrated this functionality out of pthread_create_gotcha and into thread_info
- moved mpi_gotcha, fork_gotcha, exit_gotcha, rcclp into omnitrace::component namespace
- split backtrace up into backtrace, backtrace_metrics, backtrace_timestamp components
- sampling.cpp handles setup and post-processing that was formerly in backtrace
- updated logging to use colors
- `OMNITRACE_COLORIZED_LOG` config variable
- updated docs on JSON output from timemory
- instrumentation info in instrumentation subfolder
- added testing for KokkosP entries
- added testing for ompt entries
- add_critical_trace function defined in critical_trace.hpp
- disable push_thread_state and pop_thread_state when thread state is Disabled or Completed
- add comp::page_rss to main bundle
- thread_data supports std::optional instead of std::unique_ptr
- thread_data supports tim::identity<T> to avoid unique_ptr or optional
- tracing::record_thread_start_time()
- tracing::push_timemory and tracing::pop_timemory are templated on CategoryT
- removed anonymous namespace from omnitrace::utility
- sampling backtrace stores instruction pointers instead of strings
- component::category_region updates
- handle disabled thread state
- handle finalized state
- fewer debug messages
- invoke thread_init()
- invoke thread_init_sampling()
- handle push/pop count based on category
- push/pop count only modified when used
- component::cpu_freq
- components/ensure_storage.hpp
- reworked the pthread_create replacement function
- updated parallel-overhead example to report # of times locked
- OMNITRACE_MAX_UNWIND_DEPTH build option
- update timemory submodule
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@@ -191,7 +191,7 @@ OMNITRACE_CRITICAL_TRACE = false
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OMNITRACE_CRITICAL_TRACE_BUFFER_COUNT = 2000
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OMNITRACE_CRITICAL_TRACE_COUNT = 0
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OMNITRACE_CRITICAL_TRACE_DEBUG = false
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OMNITRACE_CRITICAL_TRACE_NUM_THREADS = 8
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OMNITRACE_THREAD_POOL_SIZE = 8
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OMNITRACE_CRITICAL_TRACE_PER_ROW = 0
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OMNITRACE_CRITICAL_TRACE_SERIALIZE_NAMES = false
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OMNITRACE_DEBUG = false
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@@ -287,7 +287,7 @@ $ omnitrace-avail -S -bd
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| OMNITRACE_CRITICAL_TRACE_BUFFER_COUNT | Number of critical trace records to ... |
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| OMNITRACE_CRITICAL_TRACE_COUNT | Number of critical trace to export (... |
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| OMNITRACE_CRITICAL_TRACE_DEBUG | Enable debugging for critical trace |
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| OMNITRACE_CRITICAL_TRACE_NUM_THREADS | Number of threads to use when genera... |
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| OMNITRACE_THREAD_POOL_SIZE | Number of threads to use when genera... |
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| OMNITRACE_CRITICAL_TRACE_PER_ROW | How many critical traces per row in ... |
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| OMNITRACE_CRITICAL_TRACE_SERIALIZE_N... | Include names in serialization of cr... |
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| OMNITRACE_DEBUG | Enable debug output |
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@@ -1200,21 +1200,20 @@ OMNITRACE_USE_PERFETTO = $ENABLE
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OMNITRACE_USE_TIMEMORY = $ENABLE
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OMNITRACE_USE_SAMPLING = $SAMPLE
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OMNITRACE_USE_PROCESS_SAMPLING = $SAMPLE
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OMNITRACE_CRITICAL_TRACE = OFF
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# debug
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OMNITRACE_DEBUG = OFF
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OMNITRACE_VERBOSE = 1
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# output fields
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OMNITRACE_OUTPUT_PATH = omnitrace-example-output
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OMNITRACE_OUTPUT_PATH = omnitrace-output
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OMNITRACE_OUTPUT_PREFIX = %tag%/
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OMNITRACE_TIME_OUTPUT = OFF
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OMNITRACE_USE_PID = OFF
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# timemory fields
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OMNITRACE_PAPI_EVENTS = PAPI_TOT_INS PAPI_FP_INS
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OMNITRACE_TIMEMORY_COMPONENTS = wall_clock trip_count
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OMNITRACE_TIMEMORY_COMPONENTS = wall_clock peak_rss trip_count
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OMNITRACE_MEMORY_UNITS = MB
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OMNITRACE_TIMING_UNITS = sec
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@@ -1226,7 +1225,6 @@ OMNITRACE_SAMPLING_GPUS = $env:HIP_VISIBLE_DEVICES
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# misc env variables (see metadata JSON file after run)
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$env:OMNITRACE_SAMPLING_KEEP_DYNINST_SUFFIX = OFF
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$env:OMNITRACE_SAMPLING_KEEP_INTERNAL = OFF
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```
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### Sample JSON Configuration File
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