778af2a760
* omnitrace namespace
* Kokkos + Lulesh example/tests
* Sampling support + more
- OMNITRACE_BUILD_TESTING option
- sampling support
- pthread_gotcha
- fixes to labels for mpi_gotcha, fork_gotcha, omnitrace_component
- tasking::block_signals, tasking::unblock_signals
- instrumentation mode option in omnitrace exe
- argument option groups in omnitrace exe
- categories in omnitrace settings
- remove TIMEMORY_ prefixed options
* Release workflow updates
* Updated settings printing
* Fixed defaults in README
* Tweak setting defaults in README
* CMake fixes
* cmake-format
* clang-format
* LULESH_USE_MPI OFF
* LULESH_USE_MPI fix
* timemory add_secondary fix
* timemory ambiguous internal namespace fix
* Update timemory submodule
* Handle output path/prefix in omnitrace
- updated timemory
- updated test environment
* sampling + papi fix
* Fix to sampling without PAPI
* Fix for using too many processors in CI
* formatting
* Updated CI
- minor cmake tweaks
- updated timemory submodule
* Updated CI
* Updated CI
* CI + timemory updates
- data race fixes
* CI updates + debug for sampling
* Sampling updates
- moved tasking::{block,unblock}_signals to sampling namespace
- improvements to sampling w.r.t. thread-locality
* Minimum OMNITRACE_THREAD_COUNT of 128
* Handle multiple dims in sampler data
* Configure libunwind support for timemory
* Improved safeguards for sampling
- updated CI
- lulesh runtime-instrument test tweak
* formatting
* CI updates + sampler updates + misc
- fixed stack-buffer-overflow in omnitrace (get_*file_line_info)
- test labels
- steady_clock instead of system_clock in sampler
- update dyninst submodule with upgradePlaceholder fix
- disable OMNITRACE_BUILD_TESTING by default
* Updated timemory submodule
- hidden visibility for timemory
- storage finalizers do not capture this
* Update timemory submodule
- component visibility updates
* Reworked header includes
- use <...> for timemory headers
- always include <library/defines.hpp>
* Rename some config options
* Update PTL submodule
* Update kokkos submodule
* Updated sampling
* Updated CI
* Reworked instrumentation exe
- lowered min-address-range threshold to 256
- extended whole function exclude
* CI fix + timemory submodule update
- TIMEMORY_VISIBLE on component base
- RelWithDebugInfo -> RelWithDebInfo
- Info output for parallel-overhead
* Sampling flags + transpose update + CI update
- disable critical trace for parallel-overhead in CI
- SA_RESTART only in sampler
- reworked transpose example to use fewer threads
* CI update
- removed ubuntu-focal-external-debug
- reduced data artifacts upload
* CI timeouts
- updated timemory submodule
- minor tweaks to omnitrace exe logging
* LICENSE updates (partial)
* CI Test stage timeout extension
* Docker and Packaging updates
* Miscellaneous fixes/tweaks
- gpu.hpp / gpu.cpp
- disable roctracer component if no devices
- re-enable InstrStackFrames by default
- disable sampling by default
- pthread_gotcha::m_enable_sampling is false by default
- timemory submodule update w/ sampler and pop(tid) updates
- fix minor bug in sampler logic
- CMake: OMNITRACE_USE_HIP option
- roctracer + timemory fix
* Replaced OMNITRACE_USE_ROCTRACER with OMNITRACE_USE_HIP where appropriate
* cmake format
* Sampler deadlock fixes
* Removed debug messages from sampler
* Fix for MPI detection + test tweaks + misc
* Sampler deadlock fixes + misc
- removed papi_tot_ins
- pthread_gotcha blocks signals globally until sampler is setup
- metadata specialization for sampling components
- OMNITRACE_INSTRUMENTATION_MODE -> OMNITRACE_MODE
- default sampling delay increased to 0.05 from 1.0e-6
- removed {block,unblock}_signals from critical_trace and ptl
- no longer necessary to use
- sampling delay minimum is 1.0e-3
- OMNITRACE_BUILD_HIDDEN_VISIBILITY
* omnitrace-avail + libunwind update + restructure
- restructured omnitrace components
- build custom omnitrace-avail executable
- updated libunwind to avoid malloc in get_unw_backtrace
* Fix remaining reorganization issues
- removed some duplicate code
- fixed some trait specializations after implicit instatiation
- formatting
* ensure_storage fix + avail improvements
- fix ensure_storage when component not avail
- suppress irrelevant info in omnitrace-avail
* Delay settings initialization
- slight tweak to tests w/ MPI
* Disable OpenMPI testing w/ ubuntu-bionic
- MPI testing is hanging bc of network interface issue on system:
> [[20462,1],0]: A high-performance Open MPI point-to-point messaging module
> was unable to find any relevant network interfaces:
> Module: OpenFabrics (openib)
> Host: fv-az19-371
> Another transport will be used instead, although this may result in
> lower performance.
> NOTE: You can disable this warning by setting the MCA parameter
> btl_base_warn_component_unused to 0.
274 lines
8.4 KiB
C++
274 lines
8.4 KiB
C++
#include <ctype.h>
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#include <stdio.h>
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#include <stdlib.h>
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#include <string.h>
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#if USE_MPI
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# include <mpi.h>
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#endif
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#include "lulesh.h"
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/* Helper function for converting strings to ints, with error checking */
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int
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StrToInt(const char* token, int* retVal)
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{
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const char* c;
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char* endptr;
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const int decimal_base = 10;
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if(token == NULL)
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return 0;
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c = token;
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*retVal = (int) strtol(c, &endptr, decimal_base);
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if((endptr != c) && ((*endptr == ' ') || (*endptr == '\0')))
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return 1;
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else
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return 0;
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}
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static void
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PrintCommandLineOptions(char* execname, int myRank)
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{
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if(myRank == 0)
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{
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printf("Usage: %s [opts]\n", execname);
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printf(" where [opts] is one or more of:\n");
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printf(" -q : quiet mode - suppress all stdout\n");
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printf(" -i <iterations> : number of cycles to run\n");
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printf(" -s <size> : length of cube mesh along side\n");
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printf(" -r <numregions> : Number of distinct regions (def: 11)\n");
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printf(" -b <balance> : Load balance between regions of a domain (def: 1)\n");
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printf(" -c <cost> : Extra cost of more expensive regions (def: 1)\n");
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printf(" -f <numfiles> : Number of files to split viz dump into (def: "
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"(np+10)/9)\n");
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printf(" -p : Print out progress\n");
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printf(
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" -v : Output viz file (requires compiling with -DVIZ_MESH\n");
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printf(" -h : This message\n");
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printf("\n\n");
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}
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}
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static void
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ParseError(const char* message, int myRank)
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{
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if(myRank == 0)
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{
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printf("%s\n", message);
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#if USE_MPI
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MPI_Abort(MPI_COMM_WORLD, -1);
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#else
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exit(-1);
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#endif
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}
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}
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void
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ParseCommandLineOptions(int argc, char* argv[], int myRank, struct cmdLineOpts* opts)
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{
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if(argc > 1)
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{
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int i = 1;
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while(i < argc)
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{
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int ok;
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/* -i <iterations> */
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if(strcmp(argv[i], "-i") == 0)
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{
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if(i + 1 >= argc)
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{
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ParseError("Missing integer argument to -i", myRank);
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}
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ok = StrToInt(argv[i + 1], &(opts->its));
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if(!ok)
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{
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ParseError("Parse Error on option -i integer value required after "
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"argument\n",
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myRank);
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}
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i += 2;
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}
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/* -s <size, sidelength> */
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else if(strcmp(argv[i], "-s") == 0)
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{
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if(i + 1 >= argc)
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{
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ParseError("Missing integer argument to -s\n", myRank);
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}
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ok = StrToInt(argv[i + 1], &(opts->nx));
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if(!ok)
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{
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ParseError("Parse Error on option -s integer value required after "
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"argument\n",
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myRank);
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}
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i += 2;
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}
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/* -r <numregions> */
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else if(strcmp(argv[i], "-r") == 0)
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{
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if(i + 1 >= argc)
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{
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ParseError("Missing integer argument to -r\n", myRank);
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}
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ok = StrToInt(argv[i + 1], &(opts->numReg));
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if(!ok)
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{
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ParseError("Parse Error on option -r integer value required after "
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"argument\n",
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myRank);
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}
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i += 2;
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}
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/* -f <numfilepieces> */
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else if(strcmp(argv[i], "-f") == 0)
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{
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if(i + 1 >= argc)
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{
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ParseError("Missing integer argument to -f\n", myRank);
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}
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ok = StrToInt(argv[i + 1], &(opts->numFiles));
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if(!ok)
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{
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ParseError("Parse Error on option -f integer value required after "
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"argument\n",
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myRank);
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}
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i += 2;
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}
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/* -p */
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else if(strcmp(argv[i], "-p") == 0)
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{
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opts->showProg = 1;
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i++;
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}
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/* -q */
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else if(strcmp(argv[i], "-q") == 0)
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{
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opts->quiet = 1;
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i++;
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}
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/* -q */
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else if(strcmp(argv[i], "-a") == 0)
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{
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opts->do_atomic = 1;
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i++;
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}
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else if(strcmp(argv[i], "-b") == 0)
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{
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if(i + 1 >= argc)
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{
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ParseError("Missing integer argument to -b\n", myRank);
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}
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ok = StrToInt(argv[i + 1], &(opts->balance));
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if(!ok)
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{
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ParseError("Parse Error on option -b integer value required after "
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"argument\n",
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myRank);
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}
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i += 2;
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}
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else if(strcmp(argv[i], "-c") == 0)
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{
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if(i + 1 >= argc)
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{
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ParseError("Missing integer argument to -c\n", myRank);
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}
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ok = StrToInt(argv[i + 1], &(opts->cost));
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if(!ok)
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{
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ParseError("Parse Error on option -c integer value required after "
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"argument\n",
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myRank);
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}
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i += 2;
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}
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/* -v */
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else if(strcmp(argv[i], "-v") == 0)
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{
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#if VIZ_MESH
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opts->viz = 1;
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#else
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ParseError("Use of -v requires compiling with -DVIZ_MESH\n", myRank);
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#endif
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i++;
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}
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/* -h */
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else if(strcmp(argv[i], "-h") == 0)
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{
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PrintCommandLineOptions(argv[0], myRank);
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#if USE_MPI
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MPI_Abort(MPI_COMM_WORLD, 0);
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#else
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exit(0);
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#endif
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}
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else
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{
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char msg[80];
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PrintCommandLineOptions(argv[0], myRank);
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sprintf(msg, "ERROR: Unknown command line argument: %s\n", argv[i]);
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ParseError(msg, myRank);
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}
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}
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}
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}
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/////////////////////////////////////////////////////////////////////
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void
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VerifyAndWriteFinalOutput(Real_t elapsed_time, Domain& locDom, Int_t nx, Int_t numRanks)
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{
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// GrindTime1 only takes a single domain into account, and is thus a good way to
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// measure processor speed indepdendent of MPI parallelism. GrindTime2 takes into
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// account speedups from MPI parallelism
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Real_t grindTime1 = ((elapsed_time * 1e6) / locDom.cycle()) / (nx * nx * nx);
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Real_t grindTime2 =
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((elapsed_time * 1e6) / locDom.cycle()) / (nx * nx * nx * numRanks);
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Index_t ElemId = 0;
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printf("Run completed: \n");
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printf(" Problem size = %i \n", nx);
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printf(" MPI tasks = %i \n", numRanks);
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printf(" Iteration count = %i \n", locDom.cycle());
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printf(" Final Origin Energy = %12.6e \n", locDom.e(ElemId));
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Real_t MaxAbsDiff = Real_t(0.0);
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Real_t TotalAbsDiff = Real_t(0.0);
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Real_t MaxRelDiff = Real_t(0.0);
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for(Index_t j = 0; j < nx; ++j)
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{
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for(Index_t k = j + 1; k < nx; ++k)
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{
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Real_t AbsDiff = FABS(locDom.e(j * nx + k) - locDom.e(k * nx + j));
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TotalAbsDiff += AbsDiff;
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if(MaxAbsDiff < AbsDiff)
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MaxAbsDiff = AbsDiff;
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Real_t RelDiff = AbsDiff / locDom.e(k * nx + j);
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if(MaxRelDiff < RelDiff)
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MaxRelDiff = RelDiff;
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}
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}
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// Quick symmetry check
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printf(" Testing Plane 0 of Energy Array on rank 0:\n");
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printf(" MaxAbsDiff = %12.6e\n", MaxAbsDiff);
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printf(" TotalAbsDiff = %12.6e\n", TotalAbsDiff);
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printf(" MaxRelDiff = %12.6e\n\n", MaxRelDiff);
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// Timing information
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printf("\nElapsed time = %10.2f (s)\n", elapsed_time);
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printf("Grind time (us/z/c) = %10.8g (per dom) (%10.8g overall)\n", grindTime1,
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grindTime2);
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printf("FOM = %10.8g (z/s)\n\n",
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1000.0 / grindTime2); // zones per second
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return;
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}
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